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1

Beyond Istanbul's ‘Laz Underworld’: Ottoman Paramilitarism and the Rise of Turkish Organised Crime, 1908–1950

Journal:

Contemporary European History

Year:

2010

Language:

english

File:

PDF, 245 KB

english, 2010

2

Istanbul Confidential: Heroin, Espionage, and Politics in Cold War Turkey, 1945-1960

Journal:

Diplomatic History

Year:

2013

Language:

english

File:

PDF, 247 KB

english, 2013

3

Poppy Politics: American Agents, Iranian Addicts and Afghan Opium, 1945–80

Journal:

Iranian Studies

Year:

2012

Language:

english

File:

PDF, 176 KB

english, 2012

4

In the Hunt for the “Sultans of Smack:” Dope, Gangsters and the Construction of the Turkish Deep State

Journal:

The Middle East Journal

Year:

2011

Language:

english

File:

PDF, 151 KB

english, 2011

5

Military Intelligence and the Arab Revolt: The First Modern Intelligence War (review)

Journal:

The Journal of Military History

Year:

2009

Language:

english

File:

PDF, 293 KB

english, 2009

6

NOTORIOUS SUBJECTS, INVISIBLE CITIZENS: NORTH CAUCASIAN RESISTANCE TO THE TURKISH NATIONAL MOVEMENT IN NORTHWESTERN ANATOLIA, 1919–23

Journal:

International Journal Middle East Studies

Year:

2008

Language:

english

File:

PDF, 142 KB

english, 2008

7

Sean McMeekin. The Ottoman Endgame: War, Revolution, and the Making of the Modern Middle East, 1908–1923.

Journal:

The American Historical Review

Year:

2017

Language:

english

File:

PDF, 42 KB

english, 2017

8

Between the Cracks: Macedonia and the 'Mental Map' of Europe

Journal:

Canadian Slavonic Papers / Revue Canadienne des Slavistes

Year:

2008

Language:

english

File:

PDF, 1.42 MB

english, 2008

9

Last Rites for a 'Pure Bandit': Clandestine Service, Historiography and the Origins of the Turkish 'Deep State'

Journal:

Year:

2010

Language:

english

File:

PDF, 547 KB

english, 2010

10

Janet Klein, Margins of Empire: Kurdish Militias in the Ottoman Tribal Zone (Palo Alto, Calif.: Stanford University Press, 2011). Pp. 288. $55.00 cloth.

Journal:

International Journal Middle East Studies

Year:

2012

Language:

english

File:

PDF, 37 KB

english, 2012

11

Perspectives on ENCODE

Snyder, Michael P., Gingeras, Thomas R., Moore, Jill E., Weng, Zhiping, Gerstein, Mark B., Ren, Bing, Hardison, Ross C., Stamatoyannopoulos, John A., Graveley, Brenton R., Feingold, Elise A., Pazin, M

Journal:

Year:

2020

File:

PDF, 1.71 MB

2020

12

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Birney, Ewan, Stamatoyannopoulos, John A., Dutta, Anindya, Guigó, Roderic, Gingeras, Thomas R., Margulies, Elliott H., Weng, Zhiping, Snyder, Michael, Dermitzakis, Emmanouil T., Stamatoyannopoulos, Jo

Journal:

Year:

2007

Language:

english

File:

PDF, 4.47 MB

english, 2007

13

Implications of chimaeric non-co-linear transcripts

Gingeras, Thomas R.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.58 MB

english, 2009

14

Genomic Maps and Comparative Analysis of Histone Modifications in Human and Mouse

Bradley E. Bernstein, Michael Kamal, Kerstin Lindblad-Toh, Stefan Bekiranov, Dione K. Bailey, Dana J. Huebert, Scott McMahon, Elinor K. Karlsson, Edward J. Kulbokas III, Thomas R. Gingeras, Stuart L.

Journal:

Year:

2005

Language:

english

File:

PDF, 790 KB

english, 2005

15

In the Hunt for the ``Sultans of Smack:'' Dope, Gangsters and the Construction of the Turkish Deep State

Journal:

The Middle East Journal

Year:

2011

Language:

english

File:

PDF, 1.67 MB

english, 2011

16

High-throughput annotation of full-length long noncoding RNAs with capture long-read sequencing

Lagarde, Julien, Uszczynska-Ratajczak, Barbara, Carbonell, Silvia, Pérez-Lluch, Sílvia, Abad, Amaya, Davis, Carrie, Gingeras, Thomas R, Frankish, Adam, Harrow, Jennifer, Guigo, Roderic, Johnson, Rory

Journal:

Nature Genetics

Year:

2017

Language:

english

File:

PDF, 7.27 MB

english, 2017

17

Microarrays and genetic epidemiology: A multipurpose tool for a multifaceted field

Dennise D. Dalma-Weiszhausz, Marina E. Chicurel, Thomas R. Gingeras

Journal:

Genetic Epidemiology

Year:

2002

Language:

english

File:

PDF, 140 KB

english, 2002

18

Yolk proteins in Drosophila: Identification and site of synthesis

H. Gelti-Douka, T. R. Gingeras, M. P. Kambysellis

Journal:

Journal of Experimental Zoology Part A Ecological Genetics and Physiology

Year:

1974

Language:

english

File:

PDF, 277 KB

english, 1974

19

HIV-1 infectability of CD4+ lymphocytes with relation to β-chemokines and the CCR5 coreceptor

William A. Paxton, Stanley Kang, Rong Liu, Nathanial R. Landau, Thomas R. Gingeras, Lijun Wu, Charles R. Mackay, Richard A. Koup

Journal:

Immunology Letters

Year:

1999

Language:

english

File:

PDF, 109 KB

english, 1999

20

Analysis of Drug Pharmacology towards Predicting Drug Behavior by Expression Profiling Using High-Density Oligonucleotide Arrays

JING-SHAN HU, MARK DURST, REINHOLD KERB, VIVI TRUONG, JING-TYAN MA, ELINA KHURGIN, DAVID BALABAN, THOMAS R. GINGERAS, BRIAN B. HOFFMAN

Journal:

Annals of the New York Academy of Sciences

Year:

2000

Language:

english

File:

PDF, 3.04 MB

english, 2000

21

Magnitude and specificity of temporal gene expression during HIV-1 infection of a CD4+ T cell

Corbeil, Jacques, Sheeter, Dennis, Rought, Steffney, Du, Pinyi, Ferguson, Mark, Masys, Daniel R., Welsh, John B., Huang, David, Drenkow, Jorg, Richman, Douglas D., Gingeras, Thomas

Journal:

Nature Genetics

Year:

1999

Language:

english

File:

PDF, 119 KB

english, 1999

22

High density synthetic oligonucleotide arrays

Lipshutz, Robert J., Fodor, Stephen P.A., Gingeras, Thomas R., Lockhart, David J.

Journal:

Nature Genetics

Year:

1999

Language:

english

File:

PDF, 240 KB

english, 1999

23

Missing lincs in the transcriptome

Gingeras, Thomas

Journal:

Nature Biotechnology

Year:

2009

Language:

english

File:

PDF, 212 KB

english, 2009

24

The multitasking genome

Gingeras, Thomas R

Journal:

Nature Genetics

Year:

2006

Language:

english

File:

PDF, 135 KB

english, 2006

25

Mapping the strand-specific transcriptome of fission yeast

Gingeras, Thomas R

Journal:

Nature Genetics

Year:

2008

Language:

english

File:

PDF, 399 KB

english, 2008

26

Genome-wide transcription and the implications for genomic organization

Kapranov, Philipp, Willingham, Aarron T., Gingeras, Thomas R.

Journal:

Nature Reviews Genetics

Year:

2007

Language:

english

File:

PDF, 399 KB

english, 2007

27

Reduced HIV-1 Infectability of CD4+Lymphocytes from Exposed-Uninfected Individuals: Association with Low Expression of CCR5 and High Production of β-Chemokines

William A. Paxton, Rong Liu, Stanley Kang, Lijun Wu, Thomas R. Gingeras, Nathanial R. Landau, Charles R. Mackay, Richard A. Koup

Journal:

Year:

1998

Language:

english

File:

PDF, 141 KB

english, 1998

28

Rank-statistics based enrichment-site prediction algorithm developed for chromatin immunoprecipitation on chip experiments

Srinka Ghosh, Heather A Hirsch, Edward Sekinger, Kevin Struhl, Thomas R Gingeras

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 1.71 MB

english, 2006

29

Differential analysis for high density tiling microarray data

Srinka Ghosh, Heather A Hirsch, Edward A Sekinger, Philipp Kapranov, Kevin Struhl, Thomas R Gingeras

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.85 MB

english, 2007

30

Modeling gene expression using chromatin features in various cellular contexts

Xianjun Dong, Melissa C Greven, Anshul Kundaje, Sarah Djebali, James B Brown, Chao Cheng, Tom R Gingeras, Mark Gerstein, Roderic Guigó, Ewan Birney, Zhiping Weng

Journal:

Year:

2012

Language:

english

File:

PDF, 988 KB

english, 2012

31

Molecular biology: RNA discrimination

Kowalczyk, Monika S., Higgs, Douglas R., Gingeras, Thomas R.

Journal:

Year:

2012

Language:

english

File:

PDF, 426 KB

english, 2012

32

Synthetic spike-in standards for RNA-seq experiments

Jiang, L., Schlesinger, F., Davis, C. A., Zhang, Y., Li, R., Salit, M., Gingeras, T. R., Oliver, B.

Journal:

Genome Research

Year:

2011

Language:

english

File:

PDF, 1.54 MB

english, 2011

33

MyD88 Primes Macrophages for Full-Scale Activation by Interferon- yet Mediates Few Responses to Mycobacterium tuberculosis

Shi, S., Nathan, C., Schnappinger, D., Drenkow, J., Fuortes, M., Block, E., Ding, A., Gingeras, T. R., Schoolnik, G., Akira, S.

Journal:

Journal of Experimental Medicine

Year:

2003

Language:

english

File:

PDF, 390 KB

english, 2003

34

STAR: ultrafast universal RNA-seq aligner

Dobin, A., Davis, C. A., Schlesinger, F., Drenkow, J., Zaleski, C., Jha, S., Batut, P., Chaisson, M., Gingeras, T. R.

Journal:

Year:

2013

Language:

english

File:

PDF, 282 KB

english, 2013

35

TUF Love for “Junk” DNA

Aarron T. Willingham, Thomas R. Gingeras

Journal:

Year:

2006

Language:

english

File:

PDF, 602 KB

english, 2006

36

Relationships between p63 Binding, DNA Sequence, Transcription Activity, and Biological Function in Human Cells

Annie Yang, Zhou Zhu, Philipp Kapranov, Frank McKeon, George M. Church, Thomas R. Gingeras, Kevin Struhl

Journal:

Year:

2006

Language:

english

File:

PDF, 578 KB

english, 2006

37

Global Transcription in Pluripotent Embryonic Stem Cells

Sol Efroni, Radharani Duttagupta, Jill Cheng, Hesam Dehghani, Daniel J. Hoeppner, Chandravanu Dash, David P. Bazett-Jones, Stuart Le Grice, Ronald D.G. McKay, Kenneth H. Buetow, Thomas R. Gingeras, To

Journal:

Year:

2008

Language:

english

File:

PDF, 1.47 MB

english, 2008

38

Characteristics of oligonucleotide tiling arrays measured by hybridizing full-length cDNA clones: Causes of signal variation and false positive signals

Daisuke Sasaki, Shinji Kondo, Norihiro Maeda, Thomas R. Gingeras, Yuki Hasegawa, Yoshihide Hayashizaki

Journal:

Year:

2007

Language:

english

File:

PDF, 936 KB

english, 2007

39

Defining subsets of naive and memory B cells based on the ability of their progeny to somatically mutate in vitro

Debra J. Decker, Phyllis-Jean Linton, Samantha Zaharevitz, Matthew Biery, Thomas R. Gingeras, Norman R. Klinman

Journal:

Year:

1995

Language:

english

File:

PDF, 960 KB

english, 1995

40

Temporal profile of replication of human chromosomes

Jeon, Y., Bekiranov, S., Karnani, N., Kapranov, P., Ghosh, S., MacAlpine, D., Lee, C., Hwang, D. S., Gingeras, T. R., Dutta, A.

Journal:

Proceedings of the National Academy of Sciences

Year:

2005

Language:

english

File:

PDF, 803 KB

english, 2005

41

Expression of the lacZ gene from two methanol-regulated promoters in Pichia pastoris

Tschopp, Juerg F., Brust, Paul F., Cregg, James M., Stillman, Cathy A., Gingeras, Thomas R.

Journal:

Nucleic Acids Research

Year:

1987

Language:

english

File:

PDF, 1.90 MB

english, 1987

42

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Batut, P., Dobin, A., Plessy, C., Carninci, P., Gingeras, T. R.

Journal:

Genome Research

Year:

2013

Language:

english

File:

PDF, 1.63 MB

english, 2013

43

A new specific endonuclease present in Xanthomonas holcicola, Xanthomonas papavericola and Brevibacterium luteum

Thomas R. Gingeras, Phyllis A. Myers, Julie A. Olson, Francine A. Hanberg, Richard J. Roberts

Journal:

Journal of Molecular Biology

Year:

1978

Language:

english

File:

PDF, 3.89 MB

english, 1978

44

Determination and analysis of adenovirus-2 DNA sequences which may include signals for late messenger RNA processing

S. Zain, T.R. Gingeras, P. Bullock, G. Wong, R.E. Gelinas

Journal:

Journal of Molecular Biology

Year:

1979

Language:

english

File:

PDF, 1.49 MB

english, 1979

45

De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements

Schlesinger, F., Smith, A. D., Gingeras, T. R., Hannon, G. J., Hodges, E.

Journal:

Genome Research

Year:

2013

Language:

english

File:

PDF, 2.50 MB

english, 2013

46

Origin of phenotypes: Genes and transcripts

Gingeras, T. R.

Journal:

Genome Research

Year:

2007

Language:

english

File:

PDF, 377 KB

english, 2007

47

Understanding transcriptional regulation by integrative analysis of transcription factor binding data

Cheng, C., Alexander, R., Min, R., Leng, J., Yip, K. Y., Rozowsky, J., Yan, K.-K., Dong, X., Djebali, S., Ruan, Y., Davis, C. A., Carninci, P., Lassman, T., Gingeras, T. R., Guigo, R., Birney, E., Wen

Journal:

Genome Research

Year:

2012

Language:

english

File:

PDF, 780 KB

english, 2012

48

Methodologies for in vitro nucleic acid amplification and their applications

Gingeras, T.R., Richman, D.D., Kwoh, D.Y., Guatelli, J.C.

Journal:

Veterinary Microbiology

Year:

1990

Language:

english

File:

PDF, 975 KB

english, 1990

49

Blunt-end and single-strand ligations by Escherichia coli ligase: influence on an in vitro amplication scheme

Barringer, Kevin J., Orgel, Leslie, Wahl, Geoff, Gingeras, Thomas R.

Journal:

Year:

1990

Language:

english

File:

PDF, 663 KB

english, 1990

50

[Part 1: Biological Sciences] || Cloned Restriction/Modification System from Pseudomonas aeruginosa

Thomas R. Gingeras and Joan E. Brooks

Journal:

Proceedings of the National Academy of Sciences

Year:

1983

Language:

english

File:

PDF, 1.45 MB

english, 1983

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